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AI Payment Reconciliaition

Killing fee drift: How AI-powered payment reconciliation detects overcharges and recovers 0.5–2.5 bps

AI-powered payment reconciliation helps merchants detect hidden processing overcharges, eliminate fee drift, and recover 0.5–2.5 bps in lost revenue automatically.

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Amrit Mohanty

Nov 5, 2025 (Last Updated: Nov 25, 2025)

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Blended pricing hides sins. Interchange, assessments, cross-border add-ons, FX spreads, gateway markups—each is small in isolation, but together they quietly tax your P&L. In 2023, U.S. merchants paid $172.05B in processing fees; at that scale, recovering even 1 basis point (0.01%) is material. Nilson Report This post explains how AI-powered payment reconciliation turns “fees” from a monthly black box into a daily control—by recomputing every settlement line, detecting contract drift, and producing evidence your finance team can actually use to recover cash.

The problem: fees are complex, dynamic—and rarely verified

1) Interchange is the bulk of cost—and it moves. Interchange varies by card brand, product, MCC, authentication method, and region; it often represents 70–90% of total processing cost, which is why small classification errors create outsized leakage.

2) Assessments look tiny but compound. Network dues/assessments typically run in the ~0.11–0.15% range, yet at high volume they add up—and some processors mark them up in “blended” offers, making overcharges hard to spot on statements. Finix+1

3) Contracts drift; operations change. New card programs, cross-border rules, and seasonal corridor mixes create gaps between what your contract says and what you’re invoiced. Without line-level verification, you only catch gross anomalies—months late.

4) Real-time rails compress timelines. As instant networks scale, you have less time to spot an error before the month closes. (FedNow counts 1,400+ participants and rising; the RTP network processed $481B in Q2-2025.) FRB Services+1

Bottom line: Fee control done with spreadsheets and quarterly spot-checks is no match for today’s volume and velocity.

The AI approach: contracts → code → recompute → recover

On Optimus Payment Reconciliation we treat fees as a deterministic math problem with statistical guardrails:

1) Parse contracts into a rate engine

We convert your schedules (PDF/CSA) into a versioned rate engine: rules per brand, region, MCC, CNP/CP, program codes, cross-border flags, FX handling, and tier thresholds. Each version is time-boxed so you can prove which rules applied to which settlements. This aligns with published scheme structures.

2) Recompute every settlement line

For each settlement leg, we compute expected interchange + assessments + processor fees from first principles and compare to the invoiced amount. The output is a variance vector (bps and currency) with a cause code: rounding, tier mis-application, cross-border misflag, FX spread, gateway markup, or “contract change not mirrored.”

Example: assessment charged at 0.15% where rules indicate ~0.11–0.13% baseline—flag as probable markup with supporting citations.

3) Detect drift with anomaly models

We train corridor-specific baselines (by card brand, currency pair, ticket size, day-of-week) and alert only when variance is statistically meaningful and persistent (e.g., ≥0.8 bps for 5+ days in EEA cross-border premium). This avoids “alert fatigue.”

4) Close the loop with evidence packs

For each variance cluster, Optimus produces an evidence pack: affected transaction IDs, expected vs. invoiced math, relevant contract clause/version, and a reconciliation timeline. Finance routes it via maker-checker to your acquirer/PSP. Resolutions feed back as labels to refine thresholds.

Where overcharges typically hide (and how to surface them)

  • Tier boundary slips: Volume shifts can nudge you into a higher tier; the engine computes counterfactual fees at the correct tier and quantifies the delta.
  • Cross-border misflags & FX spreads: Issuer region or program code misclassification, plus opaque FX spreads, create predictable bps slippage.
  • Assessment line inflation: While assessments are standardized at the network level, merchants often see uplifted “brand fees” in blended bundles; line-level recompute exposes the uplift.
  • Program updates not reflected: Networks update rules periodically (e.g., new Visa rule editions); if your processor doesn’t mirror changes, leakage accumulates quietly.

The finance case: why 0.5–2.5 bps matters

With U.S. swipe fees at $172.05B (2023), a recovery of 0.5–2.5 bps across selective corridors translates into meaningful six- or seven-figure annual savings for large merchants. Even advocacy analyses put the household impact of fees above $1,100/year, underscoring the macro scale of the problem that rolls up to your P&L.

Just as important: once fee validation is automated, you stop leaking in real time rather than disputing months later. That compounds as volumes grow and as instant rails (RTP, FedNow) accelerate settlement windows.

Operating model: lean team, daily control

Exception taxonomy. Treat fee variances as first-class exceptions with causes: {tier_miss, assessment_uplift, crossborder_flag, fx_spread, rounding, contract_update}. Route to a fee queue separate from ID/timing exceptions.

SLA design. Prioritize high-value corridors; target 90% variance resolution in <24h. Post provisional accruals for disputed fees and true-up automatically upon credit.

KPIs that matter.

  • Recovered basis points (RBP) by connector/region/brand
  • Fee variance detected (FVD) per 10k settlements
  • Time-to-evidence pack and win rate on fee disputes
  • Auto-match rate (your base—aim 95–98% T+0/T+1) and close time (Operational T+2, GL T+5)

You can run all of this inside Payment Reconciliation—no CSV gymnastics.

Implementation playbook (60 days to impact)

Days 0–15 — Baseline. Connect two PSPs + one bank; ingest 60 days of settlements; parse contracts into the rate engine; publish a variance heatmap (by brand/region/MCC).

Days 16–30 — Automate. Enable line-level recompute on arrival; turn on anomaly models; route fee variances to the workbench with maker-checker; start producing evidence packs.

Days 31–60 — Recover & institutionalize. Open recovery cases on sustained variance clusters; add corridor-specific rules; publish a RBP leaderboard by connector; wire postings to ERP via subledger for clean audit trails (see subledger/ERP sync on our Payment Reconciliation page).

What readers should take away

1. Fees are measurable math, not folklore. You can check every penny against contract and network rules—daily. (See Visa’s public rulebooks and interchange schedules for how granular the definitions are.)

2. AI helps where rules end. Deterministic recompute finds the obvious; anomaly detection catches blended uplifts and corridor-specific drifts you didn’t think to model.

3. Real money is recoverable—quickly. With throughput up and instant rails scaling, waiting to reconcile fees is a P&L choice.

Ready to quantify your leakage?

If you’re already on Optimus for reconciliation, switch on Fee Intelligence today. If not, start with a 60-day backtest from two PSPs: we’ll return a variance map (bps and currency), evidence packs, and a deployment plan to make fee control a daily discipline inside Payment Reconciliation.

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